Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810194.1_cds_XP_016496096.1_10353
CDS Infomation

[gene=LOC107815094] [db_xref=GeneID:107815094] [protein=probable galacturonosyltransferase 11] [protein_id=XP_016496096.1] [location=join(43055..43210,45621..47075)] [gbkey=CDS]
Sequence

ATGCGGCGGCGGGCGGCCGATTATCGGCGCCCGGTTCGAAGGAGGCTATCTTGTTGGATC
TGGTCGCTTCTTGGAATATTCACAATTGCAGGTTTCGTTTTGTTTGTAGTTCATCATCAC
CATGACCACGAGGATCACGTCGAACAACCTATTTTGGAAAGTGAGTCCAGGAATGAACAG
GTTGTGCATGAGCGTCTAAATCTCACTCAAGACATGTCAAGTGTTAATTCATACGCCAGA
CAATTAGCAGAGCAAATGACACTAGCCAAAGCTTACATCATAATAGCAAAAGAGCACAAT
AACCTTCATCTTGCGTGGGAGCTAAGTTCAAAGATAAGAAGTTGTCAATTTTTACTTTCA
AAGGCTGCAATGAAAGAAGAACCCATTCCTCTAGATGAAGCTGAGCCGATCATACGAAGT
CTATCTTCTCTCATCCTTAAGGCGCAGGATGCCCATTATGATATTGCTACAACTATGATG
ACAATGAAATCACATATTCAAGCTCTTGAAGAGCGTGCTAATGCAGCATCTGTTCAGAGT
ATGATGTTCGGACAGTTAACAGCTGAGTCCCTACCCAAAAACCTGCACTGCCTAGAACTC
AAGCTCATGGCTGACTGGCTTACAAGAAAGTCGTTGCAGGATTTTGCAGATGAGAGGAGA
AACTCACCCCGTTTAGTGGACAATAACTTGTATCACTTCTGCATATTTTCAGATAATCTG
GTGGCTGTTTCAGTAGTTATCAACTCAACCGTGGCCAATGCTGATCACCCTAAGCAGCTT
ATTTTCCATATCGTAACAGATTCAATACACTACGGACTGATGCAGGCTTGGTTTCTGAAC
AATGACTTCAAAGGTTCTACAGTAGAAGTACAGAATATTGACAACTTCGCTTGGTTGAAT
TCGTCTTATTCTCCTGCTGTAAAACAGCTATTGGCGGCAGACTCTAGAAAGTATTATTTT
GACGGATCTATGGACACAAGTGTCGAACCAAAGTTCCGGAATCCAAAATATATATATTTG
TTGAATCACCTTCGCTTTTACATACCTGAGATCTACCCCCAGTTGGAGAAGATTGTCTTT
CTTGATGACGACGTTGTAGTTCAGAAAGATCTGACACCTCTCTTTTCACTGGATTTGCAT
GGAAATGTGAACGGAGCAGTGGAAACTTGTCTTGAAGCTTTTCATCGTTATTACAAGTAT
CTCAATTTCTCAAATCCACTCATAAGCTCTAAGTTCGATCCCCAGGCCTGTGGATGGGCA
TTTGGTATGAACGTTTTTGATCTGATTGCATGGAGGAAAGCAAATGTTACTGCTCGATAT
CATTACTGGATAGAACAAAATGATGATAGGACGATTTGGAAGCTGGGAACCCTTCCACCT
GGACTATTAGCTTTTTATGGAATGACGGAGCCACTTGATCGGAGGTGGCACGTGTTGGGA
TTAGGTTATGACGCCAATGTTGACAATCGCCTGATAGAGAGTGCAGCAGTGATTCACTTC
AATGGAAACATGAAACCATGGCTTAAGTTGGGCATTAGCAGGTATAGGCCTTTGTGGGAA
CGGTATGTAAACCAGACGCACCCATACCTTCAGGATTGCGCTACTCATTGA

Peptide Sequence

PEP ID

XP_016496096.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 11 [Nicotiana tabacum]
Sequence

MRRRAADYRRPVRRRLSCWIWSLLGIFTIAGFVLFVVHHHHDHEDHVEQPILESESRNEQ
VVHERLNLTQDMSSVNSYARQLAEQMTLAKAYIIIAKEHNNLHLAWELSSKIRSCQFLLS
KAAMKEEPIPLDEAEPIIRSLSSLILKAQDAHYDIATTMMTMKSHIQALEERANAASVQS
MMFGQLTAESLPKNLHCLELKLMADWLTRKSLQDFADERRNSPRLVDNNLYHFCIFSDNL
VAVSVVINSTVANADHPKQLIFHIVTDSIHYGLMQAWFLNNDFKGSTVEVQNIDNFAWLN
SSYSPAVKQLLAADSRKYYFDGSMDTSVEPKFRNPKYIYLLNHLRFYIPEIYPQLEKIVF
LDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPLISSKFDPQACGWA
FGMNVFDLIAWRKANVTARYHYWIEQNDDRTIWKLGTLPPGLLAFYGMTEPLDRRWHVLG
LGYDANVDNRLIESAAVIHFNGNMKPWLKLGISRYRPLWERYVNQTHPYLQDCATH

Transcript Sequence

Gene sequence data has not been registered.